STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02616.1Secreted L-alanine dehydrogenase Alda. (132 aa)    
Predicted Functional Partners:
AKR02617.1
Secreted L-alanine dehydrogenase Aldb.
     0.994
AKR03339.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.778
AKR02615.1
AsnC family transcriptional regulator.
     
 0.731
AKR03809.1
Glutamate synthase.
      
 0.580
AKR00469.1
Chemotaxis protein CheY.
      
 0.546
AKR00588.1
Intracellular chorismate mutase.
      
 0.546
AKR01636.1
Secreted chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate.
      
 0.546
AKR02541.1
Pyridine nucleotide-disulfide oxidoreductase.
     
 0.544
AKR02614.1
Polyketide cyclase.
       0.508
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.507
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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