STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02617.1Secreted L-alanine dehydrogenase Aldb. (239 aa)    
Predicted Functional Partners:
AKR02616.1
Secreted L-alanine dehydrogenase Alda.
     0.994
AKR03339.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.950
AKQ99901.1
Aspartate aminotransferase.
     
 0.906
AKR02615.1
AsnC family transcriptional regulator.
     
 0.731
AKR01999.1
Glutamine synthetase 1.
     
 0.654
AKR02703.1
Glutamine synthetase.
     
 0.653
AKR02001.1
Glutamine synthetase.
     
 0.633
AKR00043.1
Isocitrate lyase Icl.
      
 0.613
AKR01673.1
Isocitrate lyase.
      
 0.613
AKR03809.1
Glutamate synthase.
      
 0.580
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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