STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02685.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
AKR02684.1
Membrane protein.
  
    0.884
AKR00431.1
Hypothetical protein.
  
     0.745
nusA
Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination.
       0.738
rimP
Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
       0.738
AKR00389.1
TetR family transcriptional regulator.
  
   
 0.683
AKR03530.1
Hypothetical protein.
  
     0.681
AKR02556.1
Hypothetical protein.
  
     0.652
AKR01032.1
Transcriptional regulator.
  
     0.643
AKR03131.1
Hypothetical protein.
  
     0.619
AKR02283.1
Hypothetical protein.
  
     0.615
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.