STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02699.1Hydrogenase nickel incorporation protein HypB. (71 aa)    
Predicted Functional Partners:
AKR02698.1
Hydrogenase nickel incorporation protein.
     0.994
AKQ99623.1
Formate hydrogenase HycE.
   
 
 0.925
ureF
Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
  
 
 0.818
AKR01600.1
Urease accessory protein UreD.
  
 
 0.726
AKR02697.1
Nickel transporter; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
  
 0.685
AKR01597.1
Urease subunit alpha.
  
  
 0.603
ureA
Urease subunit gamma; Belongs to the urease gamma subunit family.
  
  
 0.602
ureB
Urease subunit beta; Belongs to the urease beta subunit family.
  
  
 0.536
AKR02696.1
Mycothione reductase.
       0.419
AKR02695.1
Alpha/beta hydrolase.
       0.408
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.