STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02753.1Alanine rich lipoprotein LppW. (314 aa)    
Predicted Functional Partners:
AKR01583.1
Hypothetical protein.
 
     0.695
AKR00792.1
Guanylate cyclase.
  
     0.615
AKR00049.1
TetR family transcriptional regulator.
  
    0.607
AKR01359.1
Membrane protein.
  
     0.600
AKQ99853.1
ESX-3 secretion system protein EccD3.
  
     0.599
AKR00100.1
Hypothetical protein.
  
     0.543
AKR03101.1
Hypothetical protein.
  
     0.539
AKR01419.1
Channel-forming protein.
  
     0.515
AKQ99565.1
MFS transporter.
  
   
 0.504
AKR01865.1
Membrane protein.
  
     0.499
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.