STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02800.1P-hydroxybenzoic acid--AMP ligase FadD22. (705 aa)    
Predicted Functional Partners:
AKR02799.1
Polyketide synthase.
 
 
0.986
AKR01383.1
Polyketide synthase.
 
 
0.945
AKR01382.1
Polyketide synthase.
 
 
 0.944
AKR01381.1
Polyketide synthase.
 
 
0.930
AKQ99563.1
Fatty acyl-AMP ligase.
 
 0.926
AKR02180.1
Polyketide synthase.
 
 
 
 0.903
AKR02178.1
Peptide synthetase.
 
   
0.901
AKR01384.1
Polyketide synthase.
 
 
 
0.892
AKR03430.1
fatty-acid--CoA ligase.
 
 
 0.866
AKR03424.1
long-chain-fatty-acid--CoA ligase FadD17.
 
 
 0.862
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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