STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02910.1FeIII-dicitrate-binding periplasmic lipoprotein. (359 aa)    
Predicted Functional Partners:
AKQ99824.1
Iron complex transporter substrate-binding protein.
 
  
 0.867
AKR03365.1
Membrane-anchored mycosin; Belongs to the peptidase S8 family.
  
   
 0.771
AKR03835.1
Membrane-anchored mycosin.
      
 0.732
AKR03838.1
Membrane-anchored mycosin.
      
 0.732
AKR02911.1
NADP-dependent alcohol dehydrogenase C.
     
 0.625
AKR02909.1
Hypothetical protein.
       0.572
AKR02908.1
Cytochrome C oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
       0.520
AKR02907.1
Phosphoserine phosphatase.
  
    0.504
AKR00166.1
Antigen Cfp30B.
      
 0.483
AKR02182.1
Bifunctional salicyl-AMP ligase/salicyl-S-ArCP synthetase.
  
  
 0.475
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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