STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02933.1Carbon starvation protein CstA. (758 aa)    
Predicted Functional Partners:
AKR03697.1
Histidine kinase.
   
  
 0.814
lig
ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.
     
 0.784
AKR01832.1
Cobalamin biosynthesis protein CobN.
      
 0.708
AKR01929.1
UDP-N-acetylmuramate--L-alanine ligase.
     
 0.701
AKQ99835.1
Hypothetical protein.
      
 0.633
AKR00444.1
Hypothetical protein.
      
 0.633
AKR01365.1
Hypothetical protein.
      
 0.633
AKR02018.1
Hypothetical protein.
      
 0.633
AKR03308.1
Nucleoside hydrolase.
      
 0.621
AKR01079.1
Hypothetical protein.
      
 0.618
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
Server load: low (28%) [HD]