STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR03049.1TetR family transcriptional regulator. (208 aa)    
Predicted Functional Partners:
AKR00851.1
Transcriptional regulator.
  
    0.926
AKR03050.1
Aminoglycoside phosphotransferase.
     
 0.878
AKR03051.1
Hypothetical protein.
 
   
 0.857
AKR03768.1
TetR family transcriptional regulator.
  
  
 0.839
AKR00295.1
Transcriptional regulator.
  
  
 0.801
AKQ99658.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
 
 0.773
AKR01266.1
Regulatory protein.
  
   
0.762
AKR01393.1
Transcriptional regulator.
   
  
 0.755
AKR00873.1
ECF RNA polymerase sigma factor SigI; Belongs to the sigma-70 factor family.
  
  
 0.748
AKR01690.1
Transcriptional regulator.
   
    0.748
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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