STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR03078.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
AKR03858.1
Esat-6 like protein esxE; Belongs to the WXG100 family.
  
 
 0.781
AKR03360.1
EsxT; Belongs to the WXG100 family.
  
 
 0.779
AKR03826.1
Early secretory antigenic target EsxA.
  
 
 0.779
AKR03079.1
Hypothetical protein.
       0.773
AKR03859.1
ESAT-6 like protein EsxF; Belongs to the WXG100 family.
  
 
 0.633
AKQ99847.1
ESX-3 secretion system protein EccC3.
   
 
 0.494
AKR01525.1
ESX-5 secretion system protein EccC5.
   
 
 0.494
AKR03363.1
ESX-4 secretion system protein EccC4.
   
 
 0.494
AKR03846.1
ESX-2 secretion system protein EccC2b.
   
 
 0.494
AKR03847.1
ESX-2 secretion system protein EccC2a.
   
 
 0.494
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.