STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR03152.1Transmembrane alkane 1-monooxygenase AlkB. (416 aa)    
Predicted Functional Partners:
AKR03151.1
Rubredoxin RubA; Belongs to the rubredoxin family.
 
  
 0.952
AKR03150.1
Rubredoxin RubB; Belongs to the rubredoxin family.
  
  
 0.940
AKR01610.1
Alcohol dehydrogenase.
     
 0.924
AKR03149.1
TetR family transcriptional regulator.
 
    0.922
AKQ99715.1
Zinc-type alcohol dehydrogenase AdhE1.
    
 0.905
AKR00375.1
Alcohol dehydrogenase B.
    
 0.905
AKR01239.1
Alcohol dehydrogenase.
     
 0.903
AKQ99696.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.901
AKQ99778.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.901
AKR00382.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.901
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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