STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR03195.1Piperideine-6-carboxylic acid dehydrogenase; Belongs to the aldehyde dehydrogenase family. (494 aa)    
Predicted Functional Partners:
AKR03194.1
Hypothetical protein.
 
    0.971
AKR03595.1
Acetyl-coenzyme A synthetase.
  
 0.945
AKR02423.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.937
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
 
 0.927
AKR00486.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.924
AKQ99715.1
Zinc-type alcohol dehydrogenase AdhE1.
 
 0.922
AKR00375.1
Alcohol dehydrogenase B.
 
 0.922
AKR01239.1
Alcohol dehydrogenase.
  
 0.922
AKR03347.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 0.921
AKR00364.1
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
 
 
 0.918
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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