STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR03275.1Toxin RelK. (85 aa)    
Predicted Functional Partners:
AKR03274.1
Antitoxin RelJ; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 0.999
AKR00937.1
Antitoxin RelB; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.811
AKR02709.1
Antitoxin RelF; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.713
AKR00936.1
Toxin RelE.
     
 0.666
AKR03276.1
Oxidoreductase.
       0.663
AKQ99827.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.622
folD
Bifunctional protein FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.586
AKR02710.1
Toxin RelG.
     
 0.559
AKR03272.1
Hypothetical protein.
       0.536
AKR03277.1
Transmembrane ABC transporter ATP-binding protein.
       0.443
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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