STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR03280.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
AKR03279.1
ATP/GTP-binding protein.
 
  
 0.994
AKR03281.1
Dynein regulation protein LC7.
 
  
 0.985
AKR03282.1
Histidine kinase.
 
 
 0.982
AKR03278.1
Hypothetical protein.
  
  
 0.949
AKR01321.1
Peroxiredoxin.
 
      0.796
AKR00486.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.734
AKR02892.1
Electron transfer flavoprotein subunit alpha.
  
 
 0.621
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.621
AKR02893.1
Electron transfer flavoprotein subunit beta.
  
 
 0.620
AKR01818.1
Polyketide synthase.
 
 0.613
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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