STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR03282.1Histidine kinase. (876 aa)    
Predicted Functional Partners:
AKR03281.1
Dynein regulation protein LC7.
   
 0.987
AKR03280.1
Hypothetical protein.
 
 
 0.982
AKR03279.1
ATP/GTP-binding protein.
 
  
 0.981
AKR03278.1
Hypothetical protein.
  
  
 0.915
AKR02315.1
2-oxoisovalerate dehydrogenase subunit beta.
    
 0.743
AKR00938.1
Multifunctional 2-oxoglutarate metabolism enzyme.
  
 0.721
AKR01371.1
PE-PGRS family protein.
  
 
 0.693
AKR01462.1
Hypothetical protein.
    
 0.693
AKR01993.1
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.693
AKR02314.1
Branched-chain alpha-keto acid dehydrogenase subunit E2.
    
 0.693
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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