STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR03285.1Oxidoreductase. (214 aa)    
Predicted Functional Partners:
AKR03379.1
Hypothetical protein.
 
  
 0.671
AKR01624.1
Pyridoxine 5'-phosphate oxidase.
 
    0.592
AKR03286.1
F420-dependent oxidoreductase.
       0.576
AKR01079.1
Hypothetical protein.
 
  
 0.565
AKR00132.1
Glyoxalase.
 
    0.525
AKR01818.1
Polyketide synthase.
  
 
 0.494
AKQ99833.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
    0.484
AKR03080.1
Hypothetical protein.
 
  
 0.483
AKR00956.1
ABC transporter ATP-binding protein.
  
  
 0.467
dnaE2
Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
       0.426
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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