STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR03608.1Anion transporter ATPase. (340 aa)    
Predicted Functional Partners:
AKR03609.1
Anion transporter ATPase.
 
 
 
0.991
AKR03605.1
MBL fold metallo-hydrolase.
 
   
 0.802
AKR03607.1
Hypothetical protein.
       0.781
AKR03606.1
Hypothetical protein.
       0.772
AKR00065.1
Hypothetical protein.
  
     0.759
AKR00483.1
Cyclase.
  
     0.727
AKR01961.1
Cyclase.
 
     0.718
AKR00480.1
Cyclase.
 
     0.716
AKR00083.1
UDP-glucose 4-epimerase.
  
     0.708
AKR00084.1
Acyltransferase.
  
     0.703
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.