STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR03673.1Oxidoreductase. (224 aa)    
Predicted Functional Partners:
AKR03674.1
Oxidoreductase.
    0.999
AKR03672.1
Diacylglycerol O-acyltransferase.
  
   0.964
AKR03671.1
PPE family protein PPE66.
       0.773
AKR02956.1
Acetoin dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.550
AKR03804.1
HTH-type transcriptional regulator EthR.
 
   
 0.550
AKR03675.1
Cation-transporting P-type ATPase J.
  
  
 0.532
AKR00935.1
Short-chain type dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.467
AKR01098.1
Monooxygenase.
  
     0.437
AKR02166.1
Transcriptional activator protein.
 
     0.407
atpG
ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.400
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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