STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR03696.1Lipoprotein LpqH. (159 aa)    
Predicted Functional Partners:
AKR00962.1
Lipoprotein LprA.
      
 0.863
AKR00469.1
Chemotaxis protein CheY.
      
 0.836
AKR00564.1
Periplasmic phosphate-binding lipoprotein PstS3; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
      
 0.836
AKR00569.1
Periplasmic phosphate-binding lipoprotein PstS2.
      
 0.830
AKR03825.1
ESAT-6-like protein EsxB.
      
 0.811
AKR01607.1
Alanine and proline-rich secreted protein Apa.
      
 0.810
AKR00572.1
Periplasmic phosphate-binding lipoprotein PstS1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
   
  
 0.764
AKR02798.1
Lipoprotein LppX.
      
 0.753
AKR01072.1
Lipoprotein LprF.
      
 0.655
AKR00859.1
Hypothetical protein.
      
 0.602
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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