STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR03798.1ESX-1 transcriptional regulator EspR. (132 aa)    
Predicted Functional Partners:
AKR03799.1
Hypothetical protein.
 
   
 0.765
AKR03541.1
ESX-1 secretion-associated protein EspA.
      
 0.756
AKR00782.1
Hypothetical protein.
  
     0.687
AKR03570.1
Hypothetical protein.
  
     0.686
AKR03339.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.656
AKR00910.1
Anti-sigma factor RseA.
  
  
 0.649
AKR01865.1
Membrane protein.
  
     0.624
AKR03540.1
ESX-1 secretion-associated protein EspC.
      
 0.615
AKR00850.1
Monoacyl phosphatidylinositol tetramannoside-binding protein LpqW.
  
   
 0.589
AKR03833.1
ESX-1 secretion-associated protein EspB.
   
  
 0.580
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.