STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR03865.1Peptidoglycan biosynthesis protein MviN. (1184 aa)    
Predicted Functional Partners:
AKQ99546.1
FHA domain-containing protein FhaA.
 
 
 
 0.991
AKR03864.1
Hypothetical protein.
   
 0.932
AKR03863.1
DNA mismatch repair protein MutT; Belongs to the Nudix hydrolase family.
       0.875
AKR03799.1
Hypothetical protein.
  
     0.744
AKR03867.1
anti-sigma-M factor RsmA.
       0.744
AKR03866.1
ECF RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily.
     
 0.738
AKR02218.1
Hypothetical protein.
  
  
 0.711
AKR03861.1
poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.699
AKQ99526.1
Hypothetical protein; Belongs to the UPF0232 family.
      
 0.681
AKQ99948.1
Hypothetical protein.
 
     0.678
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.