STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOX96463.1Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)    
Predicted Functional Partners:
KOX97062.1
Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.903
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. Also exhibits THF-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.894
gcvT
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.886
KOX95960.1
Alanine--glyoxylate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.883
KOX97405.1
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.882
KOX96670.1
Glycine cleavage system protein T; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.879
KOX96880.1
Glycine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.874
KOX96069.1
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.864
KOX96084.1
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.864
KOX96881.1
Glycine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.848
Your Current Organism:
Halorubrum tropicale
NCBI taxonomy Id: 1765655
Other names: CECT 9000, H. tropicale, Halorubrum sp. 5, Halorubrum sp. V5, Halorubrum tropicale Sanchez-Nieves et al. 2016, V5
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