STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPG17267.1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)    
Predicted Functional Partners:
OPG17271.1
Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.787
OPG17266.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.780
OPG17344.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.780
OPG17270.1
butyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.737
OPG17634.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.726
OPG17268.1
Phosphotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.724
OPG17343.1
succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.710
OPG15247.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.701
OPG16338.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.694
OPG15719.1
Ring-cleaving dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.677
Your Current Organism:
Acidibacillus ferrooxidans
NCBI taxonomy Id: 1765683
Other names: A. ferrooxidans, Alicyclobacillaceae bacterium ITV01, Alicyclobacillaceae bacterium SLC40, Firmicutes bacterium BSH1, Firmicutes bacterium MCF99, Gram-positive iron-oxidizing acidophile G1, Gram-positive iron-oxidizing acidophile SLC66, bacterium GS1, strain SLC66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.