STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPG17275.1Trehalose utilization protein ThuA; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)    
Predicted Functional Partners:
OPG16484.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.790
OPG16487.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.707
OPG16271.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.550
OPG16274.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.547
OPG17590.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.546
OPG16275.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.519
OPG17276.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.427
OPG17277.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.427
OPG17179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.410
OPG15234.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.400
Your Current Organism:
Acidibacillus ferrooxidans
NCBI taxonomy Id: 1765683
Other names: A. ferrooxidans, Alicyclobacillaceae bacterium ITV01, Alicyclobacillaceae bacterium SLC40, Firmicutes bacterium BSH1, Firmicutes bacterium MCF99, Gram-positive iron-oxidizing acidophile G1, Gram-positive iron-oxidizing acidophile SLC66, bacterium GS1, strain SLC66
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.