STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPG16808.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)    
Predicted Functional Partners:
scpA
Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.895
OPG17110.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.837
OPG16809.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.772
cinA
Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
    
  0.720
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 0.684
OPG17218.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.674
OPG15031.1
Methyl-accepting chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.674
OPG16810.1
Stage 0 sporulation protein J; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.
  
 
 0.667
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.665
OPG15130.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.662
Your Current Organism:
Acidibacillus ferrooxidans
NCBI taxonomy Id: 1765683
Other names: A. ferrooxidans, Alicyclobacillaceae bacterium ITV01, Alicyclobacillaceae bacterium SLC40, Firmicutes bacterium BSH1, Firmicutes bacterium MCF99, Gram-positive iron-oxidizing acidophile G1, Gram-positive iron-oxidizing acidophile SLC66, bacterium GS1, strain SLC66
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