STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42099.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)    
Predicted Functional Partners:
APZ42024.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.943
APZ42087.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.943
APZ43826.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.669
APZ44502.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.666
APZ44403.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.630
APZ44501.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.606
APZ42720.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
APZ42098.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.553
APZ42102.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.507
Your Current Organism:
Acidihalobacter ferrooxidans
NCBI taxonomy Id: 1765967
Other names: A. ferrooxidans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.