STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI24116.1Hypothetical protein. (171 aa)    
Predicted Functional Partners:
patA
Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.816
ALI24115.1
Carbon dioxide concentrating mechanism protein CcmL, putative.
       0.809
ALI24118.1
Alcohol dehydrogenase; Acetaldehyde dehydrogenase.
       0.809
ALI24117.1
Hypothetical protein.
       0.788
ALI24114.1
Microcompartment protein.
       0.786
ALI24113.1
Hypothetical protein.
       0.777
ALI24112.1
Aminoglycoside phosphotransferase.
       0.772
fabG-2
3-oxoacyl-[acyl-carrier protein] reductase.
       0.717
ALI24110.1
Putative transcriptional regulator of N-Acetylglucosamine utilization, GntR family.
       0.578
ALI24120.1
Amino acid permease family protein.
       0.506
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.