STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI24153.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
glgB
1,4-alpha-glucan (glycogen) branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.749
ALI26843.1
Malto-oligosyltrehalose trehalohydrolase.
  
 0.744
iniA
IniA.
  
     0.570
ALI27443.1
Hypothetical protein.
 
 
 0.563
ALI24154.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.547
ALI29420.1
Undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.540
ALI26569.1
Putative EXPORTED PROTEIN.
 
 
 0.538
iniC
IniC.
 
    0.523
ALI28129.1
Glycogen phosphorylase.
  
 
 0.522
glgC_1
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase.
  
 
 0.498
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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