Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI24161.1 | ALI24168.1 | XA26_02950 | XA26_03020 | Putative phosphotriesterase. | Ribonucleotide-diphosphate reductase subunit beta. | 0.536 |
ALI24161.1 | envR | XA26_02950 | XA26_03010 | Putative phosphotriesterase. | Transcriptional regulator, TetR family. | 0.537 |
ALI24165.1 | ALI24166.1 | XA26_02990 | XA26_03000 | Hypothetical protein. | MFS permease. | 0.564 |
ALI24165.1 | ALI24168.1 | XA26_02990 | XA26_03020 | Hypothetical protein. | Ribonucleotide-diphosphate reductase subunit beta. | 0.435 |
ALI24165.1 | envR | XA26_02990 | XA26_03010 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.450 |
ALI24166.1 | ALI24165.1 | XA26_03000 | XA26_02990 | MFS permease. | Hypothetical protein. | 0.564 |
ALI24166.1 | ALI24168.1 | XA26_03000 | XA26_03020 | MFS permease. | Ribonucleotide-diphosphate reductase subunit beta. | 0.591 |
ALI24166.1 | envR | XA26_03000 | XA26_03010 | MFS permease. | Transcriptional regulator, TetR family. | 0.617 |
ALI24168.1 | ALI24161.1 | XA26_03020 | XA26_02950 | Ribonucleotide-diphosphate reductase subunit beta. | Putative phosphotriesterase. | 0.536 |
ALI24168.1 | ALI24165.1 | XA26_03020 | XA26_02990 | Ribonucleotide-diphosphate reductase subunit beta. | Hypothetical protein. | 0.435 |
ALI24168.1 | ALI24166.1 | XA26_03020 | XA26_03000 | Ribonucleotide-diphosphate reductase subunit beta. | MFS permease. | 0.591 |
ALI24168.1 | envR | XA26_03020 | XA26_03010 | Ribonucleotide-diphosphate reductase subunit beta. | Transcriptional regulator, TetR family. | 0.966 |
ALI24961.1 | ALI27961.1 | XA26_11080 | XA26_41540 | Beta-carotene ketolase. | Hypothetical protein. | 0.513 |
ALI24961.1 | envR | XA26_11080 | XA26_03010 | Beta-carotene ketolase. | Transcriptional regulator, TetR family. | 0.494 |
ALI26308.1 | ALI27961.1 | XA26_24650 | XA26_41540 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.405 |
ALI26308.1 | envR | XA26_24650 | XA26_03010 | Transcriptional regulator, TetR family. | Transcriptional regulator, TetR family. | 0.608 |
ALI27170.1 | envR | XA26_33430 | XA26_03010 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.489 |
ALI27961.1 | ALI24961.1 | XA26_41540 | XA26_11080 | Hypothetical protein. | Beta-carotene ketolase. | 0.513 |
ALI27961.1 | ALI26308.1 | XA26_41540 | XA26_24650 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.405 |
ALI27961.1 | envR | XA26_41540 | XA26_03010 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.489 |
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