STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI24269.1Hypothetical protein. (892 aa)    
Predicted Functional Partners:
ALI29258.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 
 0.881
ALI24471.1
Hypothetical protein.
  
 
 0.783
devS
DevS.
  
 
 0.645
ALI26906.1
Adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
 
 
 0.626
yybR_7
Transcriptional regulator, HxlR family.
  
  
 0.612
ALI24189.1
Putative two-component system sensor kinase.
 
 
 0.602
ALI24358.1
Hypothetical protein.
 
 
 0.587
ALI25366.1
Sensor histidine kinase.
 
 
 0.582
ALI28177.1
Two-component sensor histidine kinase.
 
 
 0.580
ALI27307.1
Hypothetical protein.
  
     0.546
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.