Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI24390.1 | ykgE | XA26_05290 | XA26_05320 | Hypothetical protein. | YkgE. | 0.496 |
ALI24390.1 | ykgF | XA26_05290 | XA26_05310 | Hypothetical protein. | YkgF. | 0.498 |
ALI24390.1 | ykgG | XA26_05290 | XA26_05300 | Hypothetical protein. | YkgG. | 0.497 |
ALI24394.1 | ykgE | XA26_05330 | XA26_05320 | Hydrolase; Alpha-beta fold family, putative. | YkgE. | 0.551 |
ALI24394.1 | ykgF | XA26_05330 | XA26_05310 | Hydrolase; Alpha-beta fold family, putative. | YkgF. | 0.558 |
ALI24394.1 | ykgG | XA26_05330 | XA26_05300 | Hydrolase; Alpha-beta fold family, putative. | YkgG. | 0.558 |
ALI24494.1 | ykgF | XA26_06340 | XA26_05310 | Iron-sulfur-binding reductase. | YkgF. | 0.828 |
ALI24494.1 | ykgG | XA26_06340 | XA26_05300 | Iron-sulfur-binding reductase. | YkgG. | 0.762 |
ALI24517.1 | ykgF | XA26_06570 | XA26_05310 | Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | YkgF. | 0.408 |
ALI24517.1 | ykgG | XA26_06570 | XA26_05300 | Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | YkgG. | 0.409 |
ALI24603.1 | ALI26093.1 | XA26_07430 | XA26_22480 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Carbon starvation protein A. | 0.460 |
ALI24603.1 | ackA | XA26_07430 | XA26_07440 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.999 |
ALI24603.1 | ykgF | XA26_07430 | XA26_05310 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | YkgF. | 0.566 |
ALI24603.1 | ykgG | XA26_07430 | XA26_05300 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | YkgG. | 0.846 |
ALI26093.1 | ALI24603.1 | XA26_22480 | XA26_07430 | Carbon starvation protein A. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.460 |
ALI26093.1 | ykgG | XA26_22480 | XA26_05300 | Carbon starvation protein A. | YkgG. | 0.497 |
ackA | ALI24603.1 | XA26_07440 | XA26_07430 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.999 |
ackA | ykgF | XA26_07440 | XA26_05310 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | YkgF. | 0.437 |
ackA | ykgG | XA26_07440 | XA26_05300 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | YkgG. | 0.600 |
fabG_39 | ykgF | XA26_09850 | XA26_05310 | Oxidoreductase, short-chain dehydrogenase/reductase family. | YkgF. | 0.408 |
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