STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI24518.1Hypothetical protein. (309 aa)    
Predicted Functional Partners:
ALI28739.1
Esterase.
  
   
 0.783
ALI24517.1
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.626
ALI27567.1
Putative oxidoreductase.
   
 0.592
ALI24519.1
Hypothetical protein.
     
 0.568
fabG_33
Oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.532
lprE
Putative lipoprotein lprE precursor.
   
 0.518
lepB
Signal peptidase I; Belongs to the peptidase S26 family.
  
 
 0.517
ALI29570.1
Putative polyketide synthase.
  
 
 0.499
ALI25732.1
Long-chain-fatty-acid--CoA ligase.
  
 
 0.492
ALI24203.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.490
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.