STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI24643.1Hypothetical protein. (163 aa)    
Predicted Functional Partners:
ALI24642.1
Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.889
lipH
LipH.
       0.827
ALI24644.1
Acyl-CoA dehydrogenase, short-chain specific.
       0.586
ALI24645.1
FadE30.
       0.575
ALI24646.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.575
ALI24640.1
Hypothetical protein.
       0.566
ALI24647.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.559
ALI24639.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.507
ALI24648.1
Zinc-dependent alcohol dehydrogenase.
       0.504
ALI24649.1
Long-chain-fatty-acid--CoA ligase.
       0.494
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.