STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
puuP_9Amino acid permease-associated region. (484 aa)    
Predicted Functional Partners:
ALI24863.1
Transcriptional regulator, TetR family.
 
     0.829
ALI28397.1
Hypothetical protein.
  
     0.740
ALI27167.1
Neopullulanase.
  
 0.677
ALI27859.1
Alpha-glucosidase.
  
 0.677
glgE
Putative glucanase glgE; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
 0.677
treS
Trehalose synthase.
  
 0.677
ALI24862.1
Gamma-glutamyltranspeptidase.
       0.554
ALI25794.1
ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
   
 
 0.533
ALI25029.1
Hypothetical protein.
  
 0.485
ALI26430.1
Putative amino acid transporter.
  
     0.471
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.