STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI24962.1Beta-carotene ketolase. (518 aa)    
Predicted Functional Partners:
ALI24961.1
Beta-carotene ketolase.
 
   
 0.914
ALI24960.1
Hypothetical protein.
       0.634
ALI28530.1
Oxidoreductase.
 
  
 0.622
ALI27402.1
Adenylate cyclase.
 
  
 0.505
ALI26368.1
ChlI component of cobalt chelatase; Involved in B12 biosynthesis.
  
  
 0.504
ALI25056.1
Beta-carotene ketolase.
  
     0.481
ALI29733.1
Hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands.
  
    0.461
ALI27394.1
CobN component of cobalt chelatase; Involved in B12 biosynthesis.
  
  
 0.442
ALI27361.1
Putative membrane protein.
 
     0.439
ALI28737.1
Magnesium chelatase, subunit ChlI.
  
  
 0.437
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.