STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI25055.1Hypothetical protein. (258 aa)    
Predicted Functional Partners:
ALI24794.1
Transcriptional regulator, AraC family.
 
     0.557
ALI25054.1
Hypothetical protein.
       0.556
ALI29732.1
Aha1 domain protein.
 
     0.495
ALI26055.1
Transcriptional regulator, TetR family.
  
   
 0.453
ALI27883.1
Transcriptional regulator, TetR family.
  
   
 0.452
ALI26022.1
Sensory box/GGDEF family protein.
  
  
 0.444
ALI26024.1
Hypothetical protein.
  
  
 0.444
ALI29344.1
Hypothetical protein.
  
   
 0.442
ALI27440.1
Hypothetical protein.
  
     0.436
ALI26665.1
Putative membrane protein.
 
     0.419
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.