STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI25322.1Permease of the major facilitator superfamily. (486 aa)    
Predicted Functional Partners:
ALI28862.1
Hypothetical protein.
    
 0.530
ALI23953.1
Metal cation transporting ATPase, P-type ATPase superfamily.
  
 0.487
ALI25076.1
Mg(2+) transport ATPase, P-type.
  
 0.487
ALI25085.1
Cation-transporting ATPase, E1-E2 family.
  
 0.487
ALI23903.1
Hypothetical protein.
    
 0.485
ALI25045.1
Hypothetical protein.
    
 0.485
ALI26026.1
Acyl dehydratase.
  
  
 0.467
ALI25578.1
Transcriptional regulator, MarR family.
     
 0.465
ALI25321.1
Protease IV SppA-like protein; Endopeptidase IV, signal peptide peptidase.
       0.457
bcrC_1
Integral membrane protein; Rhomboid family.
  
 0.434
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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