STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI25422.1Putative cytochrome P450 hydroxylase. (401 aa)    
Predicted Functional Partners:
ALI25732.1
Long-chain-fatty-acid--CoA ligase.
  
 0.888
ALI29570.1
Putative polyketide synthase.
  
 0.872
ALI25417.1
Vanillate O-demethylase oxidoreductase; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
 0.847
ALI25421.1
Glutamine synthetase type I.
 
   
 0.832
ALI25420.1
Amino acid ABC transporter, periplasmic amino acid-binding protein, putative.
 
     0.827
ALI25423.1
Putative amino acid permease.
 
 
 0.826
ALI25418.1
Glutamine amidotransferase, class I.
 
     0.696
ALI25419.1
Gamma-glutamyl-GABA hydrolase.
 
     0.684
ALI24203.1
Malonyl CoA-acyl carrier protein transacylase.
  
 0.672
ALI24760.1
Polyketide synthase.
  
 0.672
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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