Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI25609.1 | ALI25610.1 | XA26_17620 | XA26_17630 | Succinate dehydrogenase hydrophobic membrane anchor protein. | Succinate dehydrogenase cytochrome b-556 subunit. | 0.999 |
ALI25609.1 | ALI25611.1 | XA26_17620 | XA26_17640 | Succinate dehydrogenase hydrophobic membrane anchor protein. | Cytidine deaminase. | 0.715 |
ALI25609.1 | ALI25612.1 | XA26_17620 | XA26_17650 | Succinate dehydrogenase hydrophobic membrane anchor protein. | Thymidine phosphorylase. | 0.703 |
ALI25609.1 | add | XA26_17620 | XA26_17660 | Succinate dehydrogenase hydrophobic membrane anchor protein. | Adenosine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily. | 0.641 |
ALI25609.1 | sdhA_1 | XA26_17620 | XA26_17610 | Succinate dehydrogenase hydrophobic membrane anchor protein. | Succinate dehydrogenase flavoprotein subunit. | 0.999 |
ALI25609.1 | sdhB | XA26_17620 | XA26_17600 | Succinate dehydrogenase hydrophobic membrane anchor protein. | Succinate dehydrogenase iron-sulfur protein. | 0.999 |
ALI25610.1 | ALI25609.1 | XA26_17630 | XA26_17620 | Succinate dehydrogenase cytochrome b-556 subunit. | Succinate dehydrogenase hydrophobic membrane anchor protein. | 0.999 |
ALI25610.1 | ALI25611.1 | XA26_17630 | XA26_17640 | Succinate dehydrogenase cytochrome b-556 subunit. | Cytidine deaminase. | 0.726 |
ALI25610.1 | ALI25612.1 | XA26_17630 | XA26_17650 | Succinate dehydrogenase cytochrome b-556 subunit. | Thymidine phosphorylase. | 0.682 |
ALI25610.1 | add | XA26_17630 | XA26_17660 | Succinate dehydrogenase cytochrome b-556 subunit. | Adenosine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily. | 0.702 |
ALI25610.1 | sdhA_1 | XA26_17630 | XA26_17610 | Succinate dehydrogenase cytochrome b-556 subunit. | Succinate dehydrogenase flavoprotein subunit. | 0.999 |
ALI25610.1 | sdhB | XA26_17630 | XA26_17600 | Succinate dehydrogenase cytochrome b-556 subunit. | Succinate dehydrogenase iron-sulfur protein. | 0.999 |
ALI25611.1 | ALI25609.1 | XA26_17640 | XA26_17620 | Cytidine deaminase. | Succinate dehydrogenase hydrophobic membrane anchor protein. | 0.715 |
ALI25611.1 | ALI25610.1 | XA26_17640 | XA26_17630 | Cytidine deaminase. | Succinate dehydrogenase cytochrome b-556 subunit. | 0.726 |
ALI25611.1 | ALI25612.1 | XA26_17640 | XA26_17650 | Cytidine deaminase. | Thymidine phosphorylase. | 0.999 |
ALI25611.1 | ALI25626.1 | XA26_17640 | XA26_17790 | Cytidine deaminase. | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.978 |
ALI25611.1 | add | XA26_17640 | XA26_17660 | Cytidine deaminase. | Adenosine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily. | 0.892 |
ALI25611.1 | deoC | XA26_17640 | XA26_52300 | Cytidine deaminase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.831 |
ALI25611.1 | ppnP | XA26_17640 | XA26_51100 | Cytidine deaminase. | Putative cytoplasmic protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions. | 0.903 |
ALI25611.1 | sdhA_1 | XA26_17640 | XA26_17610 | Cytidine deaminase. | Succinate dehydrogenase flavoprotein subunit. | 0.715 |
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