STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI25693.1Hypothetical protein. (396 aa)    
Predicted Functional Partners:
ALI26914.1
Hypothetical protein.
  
     0.686
ALI29137.1
Transcriptional regulator, TetR family.
  
     0.635
ALI24795.1
Transcriptional regulator, TetR family.
  
     0.573
ALI29353.1
Hypothetical protein.
 
     0.569
ALI25692.1
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit.
       0.553
fabG_36
Enoyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.538
ALI25691.1
Hypothetical protein.
       0.532
ALI25690.1
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.525
ALI24886.1
Hypothetical protein.
  
     0.493
ALI27157.1
Hypothetical protein.
  
     0.459
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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