STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI25712.1NTP pyrophosphohydrolase; Family includes oxidative damage repair enzymes. (182 aa)    
Predicted Functional Partners:
ALI25713.1
Coenzyme F420-1:L-glutamate ligase; domain of unknown function.
      0.944
cofD
LPPG:FO 2-phospho-L-lactate transferase; Lactyl (2) diphospho-(5')guanosine:7, 8-didemethyl-8-hydroxy-5-deazariboflavin 2-phospho-L-lactate transferase.
       0.889
nnrE
NAD(P)HX epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epime [...]
  
 0.853
rhlE_2
ATP-dependent RNA helicase.
  
 0.686
ALI25783.1
Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
  
 0.686
deaD
Cold-shock DEAD-box protein A; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.
  
 0.686
ALI27953.1
Enoyl-[acyl-carrier-protein] reductase of FASI; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase of FASI; [Acyl-carrier-protein] malonyl transferase of FASI; [Acyl-carrier-protein] palmitoyl transferase of FASI; Acyl carrier protein of FASI; 3-oxoacyl-[acyl-carrier-protein] reductase of FASI; 3-oxoacyl-[acyl-carrier-protein] synthase of FASI.
  
 0.659
ALI29466.1
D-amino acid dehydrogenase small subunit.
 
 
 0.596
ALI24439.1
FAD dependent oxidoreductase.
  
 0.573
rph
Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
    
 0.541
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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