STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manOManO. (356 aa)    
Predicted Functional Partners:
manA
Mannose-6-phosphate isomerase.
  
  
 0.960
pmmA
Phosphomannomutase.
  
  
 0.904
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
  
 0.898
ALI25493.1
Inosine-uridine preferring nucleoside hydrolase.
  
  
 0.834
ALI27394.1
CobN component of cobalt chelatase; Involved in B12 biosynthesis.
     
 0.828
ALI29881.1
Hypothetical protein.
  
   
 0.802
ALI23934.1
PTS system, fructose-specific IIB component; PTS system, fructose-specific IIC component.
     
 0.781
ALI25623.1
Phosphomannomutase.
  
  
 0.767
ALI28927.1
Putative membrane protein.
  
     0.759
ALI24575.1
Hypothetical protein.
 
     0.754
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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