Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI23934.1 | manA | XA26_00680 | XA26_18730 | PTS system, fructose-specific IIB component; PTS system, fructose-specific IIC component. | Mannose-6-phosphate isomerase. | 0.942 |
ALI23934.1 | manO | XA26_00680 | XA26_18720 | PTS system, fructose-specific IIB component; PTS system, fructose-specific IIC component. | ManO. | 0.781 |
ALI24575.1 | ALI28927.1 | XA26_07150 | XA26_51330 | Hypothetical protein. | Putative membrane protein. | 0.775 |
ALI24575.1 | manO | XA26_07150 | XA26_18720 | Hypothetical protein. | ManO. | 0.754 |
ALI25493.1 | ALI27394.1 | XA26_16460 | XA26_35720 | Inosine-uridine preferring nucleoside hydrolase. | CobN component of cobalt chelatase; Involved in B12 biosynthesis. | 0.824 |
ALI25493.1 | manO | XA26_16460 | XA26_18720 | Inosine-uridine preferring nucleoside hydrolase. | ManO. | 0.834 |
ALI25493.1 | murC | XA26_16460 | XA26_36750 | Inosine-uridine preferring nucleoside hydrolase. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.824 |
ALI25623.1 | manA | XA26_17760 | XA26_18730 | Phosphomannomutase. | Mannose-6-phosphate isomerase. | 0.949 |
ALI25623.1 | manO | XA26_17760 | XA26_18720 | Phosphomannomutase. | ManO. | 0.767 |
ALI25623.1 | murC | XA26_17760 | XA26_36750 | Phosphomannomutase. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.402 |
ALI25623.1 | pmmA | XA26_17760 | XA26_18710 | Phosphomannomutase. | Phosphomannomutase. | 0.914 |
ALI27394.1 | ALI25493.1 | XA26_35720 | XA26_16460 | CobN component of cobalt chelatase; Involved in B12 biosynthesis. | Inosine-uridine preferring nucleoside hydrolase. | 0.824 |
ALI27394.1 | manO | XA26_35720 | XA26_18720 | CobN component of cobalt chelatase; Involved in B12 biosynthesis. | ManO. | 0.828 |
ALI27394.1 | murC | XA26_35720 | XA26_36750 | CobN component of cobalt chelatase; Involved in B12 biosynthesis. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.814 |
ALI28927.1 | ALI24575.1 | XA26_51330 | XA26_07150 | Putative membrane protein. | Hypothetical protein. | 0.775 |
ALI28927.1 | ALI29881.1 | XA26_51330 | XA26_61000 | Putative membrane protein. | Hypothetical protein. | 0.402 |
ALI28927.1 | manO | XA26_51330 | XA26_18720 | Putative membrane protein. | ManO. | 0.759 |
ALI29881.1 | ALI28927.1 | XA26_61000 | XA26_51330 | Hypothetical protein. | Putative membrane protein. | 0.402 |
ALI29881.1 | manO | XA26_61000 | XA26_18720 | Hypothetical protein. | ManO. | 0.802 |
manA | ALI23934.1 | XA26_18730 | XA26_00680 | Mannose-6-phosphate isomerase. | PTS system, fructose-specific IIB component; PTS system, fructose-specific IIC component. | 0.942 |
page 1 of 3