STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI25780.1Chromosome (plasmid) partitioning protein ParA; Sporulation initiation inhibitor protein Soj. (246 aa)    
Predicted Functional Partners:
parB
Chromosome (plasmid) partitioning protein ParB; Stage 0 sporulation protein J; Belongs to the ParB family.
 
 0.954
ALI25778.1
Isochorismate synthase.
     
 0.787
ALI25779.1
Putative phosphoglycerate mutase family protein.
  
    0.780
ALI25781.1
Serine/threonine phosphatase PPP.
  
  
 0.775
ftsK
FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
 
  
 0.740
dnaA
DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.716
ALI25777.1
Diamine acetyltransferase.
       0.701
ALI26283.1
Rossmann fold nucleotide-binding protein Smf; Possibly involved in DNA uptake.
  
  
 0.643
ALI27299.1
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 0.614
ALI25782.1
Cell division protein DivIC, stabilizes FtsL against RasP cleavage.
     
 0.575
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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