Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI24550.1 | ALI25805.1 | XA26_06900 | XA26_19580 | Hypothetical protein. | Dihydrodipicolinate synthase. | 0.900 |
ALI24550.1 | dapA | XA26_06900 | XA26_25980 | Hypothetical protein. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.900 |
ALI24550.1 | dapA_1 | XA26_06900 | XA26_22130 | Hypothetical protein. | Dihydrodipicolinate synthetase; Belongs to the DapA family. | 0.914 |
ALI24550.1 | dapB | XA26_06900 | XA26_25770 | Hypothetical protein. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.903 |
ALI25805.1 | ALI24550.1 | XA26_19580 | XA26_06900 | Dihydrodipicolinate synthase. | Hypothetical protein. | 0.900 |
ALI25805.1 | asd | XA26_19580 | XA26_56110 | Dihydrodipicolinate synthase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.983 |
ALI25805.1 | dapA | XA26_19580 | XA26_25980 | Dihydrodipicolinate synthase. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.925 |
ALI25805.1 | dapA_1 | XA26_19580 | XA26_22130 | Dihydrodipicolinate synthase. | Dihydrodipicolinate synthetase; Belongs to the DapA family. | 0.938 |
ALI25805.1 | dapB | XA26_19580 | XA26_25770 | Dihydrodipicolinate synthase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.990 |
ALI25805.1 | fucA_1 | XA26_19580 | XA26_19570 | Dihydrodipicolinate synthase. | Ribulose-5-phosphate 4-epimerase-like protein. | 0.804 |
ALI25805.1 | hom | XA26_19580 | XA26_43630 | Dihydrodipicolinate synthase. | Homoserine dehydrogenase. | 0.944 |
ALI25805.1 | lysA | XA26_19580 | XA26_43640 | Dihydrodipicolinate synthase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.772 |
ALI25805.1 | lysA-2 | XA26_19580 | XA26_48390 | Dihydrodipicolinate synthase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.796 |
ALI25805.1 | lysC | XA26_19580 | XA26_56120 | Dihydrodipicolinate synthase. | Aspartokinase; Belongs to the aspartokinase family. | 0.810 |
asd | ALI25805.1 | XA26_56110 | XA26_19580 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Dihydrodipicolinate synthase. | 0.983 |
asd | dapA | XA26_56110 | XA26_25980 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.987 |
asd | dapA_1 | XA26_56110 | XA26_22130 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Dihydrodipicolinate synthetase; Belongs to the DapA family. | 0.953 |
asd | dapB | XA26_56110 | XA26_25770 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.953 |
asd | hom | XA26_56110 | XA26_43630 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Homoserine dehydrogenase. | 0.984 |
asd | lysA | XA26_56110 | XA26_43640 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.834 |
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