STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI25892.1Alcohol dehydrogenase. (345 aa)    
Predicted Functional Partners:
ALI25891.1
Hypothetical protein.
    
 0.777
ALI29246.1
Sorbitol dehydrogenase.
 
 
 0.731
ALI25890.1
Hypothetical protein.
       0.648
ALI25836.1
Hypothetical protein.
  
 
 0.549
ALI25889.1
Hypothetical protein.
       0.547
ALI25888.1
Major facilitator family transporter.
       0.533
idnD
Alcohol dehydrogenase.
 
 
 0.513
ALI26496.1
2,3-butanediol dehydrogenase; R-alcohol forming, (R)- and (S)-acetoin-specific.
 
 
0.499
ALI24443.1
Threonine dehydrogenase.
 
 
0.497
ALI24664.1
Sorbitol dehydrogenase.
 
0.496
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.