STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI26109.1NADPH:quinone oxidoreductase. (180 aa)    
Predicted Functional Partners:
ALI26108.1
Transcriptional regulator, TetR family.
 
   
 0.892
dinB
DNA polymerase-like protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.775
ALI24567.1
Hypothetical protein.
  
 
 0.631
ALI25364.1
Flavin-dependent oxidoreductase; F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related.
  
 
 0.631
ALI25365.1
Flavin-dependent oxidoreductase; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related.
  
 
 0.631
ALI24334.1
Hypothetical protein.
  
 
 0.569
ALI27851.1
Hypothetical protein.
  
    0.567
ALI27752.1
Oxidoreductase; Flavoprotein.
     
 0.561
ALI26106.1
Hypothetical protein.
       0.554
ALI28877.1
Putative ABC sulfonate transporter, substrate binding component.
 
  
 0.503
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.