STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI26245.1Hypothetical protein. (505 aa)    
Predicted Functional Partners:
ALI29258.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
  
 0.487
ALI26246.1
Hypothetical protein.
       0.477
ALI29710.1
ABC transporter ATP-binding protein.
  
  
 0.444
ALI25558.1
Putative conserved transmembrane ATP-binding protein ABC transporter.
  
  
 0.434
ALI27870.1
ISmav2-like transposase.
  
  
 0.431
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.429
ALI23893.1
Hypothetical protein.
  
  
 0.427
ALI23894.1
Hypothetical protein.
  
  
 0.427
ALI27225.1
Hypothetical protein.
  
  
 0.427
ALI29878.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.425
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.