STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI26256.1D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (290 aa)    
Predicted Functional Partners:
ALI29253.1
D-alanyl-D-alanine carboxypeptidase.
    
 0.979
ALI26255.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
  
 
0.957
ALI25762.1
D-alanyl-D-alanine carboxypeptidase family.
    
 0.953
ALI25586.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
0.913
ALI26257.1
Hypothetical protein.
       0.558
ALI29844.1
Multimodular transpeptidase-transglycosylase.
 
  
 0.493
ALI26254.1
Sulfite reductase [NADPH] flavoprotein alpha-component.
 
     0.484
pbpA
Cell division protein FtsI-like protein; Peptidoglycan synthetase.
 
  
 0.476
ALI27503.1
Cell division protein FtsI-like protein; Peptidoglycan synthetase.
 
  
 0.471
estB_1
Beta-lactamase class C and other penicillin binding proteins.
     
 0.469
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.