STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI26333.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
ALI26642.1
Hypothetical protein.
  
   
 0.783
ALI27780.1
Hypothetical protein.
  
     0.771
ALI25110.1
Alkanal monooxygenase alpha chain.
  
     0.752
ALI28175.1
Hypothetical protein.
  
     0.737
ALI28077.1
Putative oxidoreductase.
  
     0.713
fgd1_6
N5,N10-methylenetetrahydromethanopterin reductase-like protein.
  
   
 0.704
ALI24784.1
Coenzyme F420-dependent oxidoreductase.
 
     0.690
ALI25165.1
Putative Rif11-like protein.
  
     0.687
ALI26089.1
Putative OXIDOREDUCTASE.
  
   
 0.659
ALI29774.1
Hypothetical protein.
  
     0.653
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.