Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI24981.1 | ALI26338.1 | XA26_11280 | XA26_24950 | Pyridoxine 5'-phosphate oxidase. | Hypothetical protein. | 0.593 |
ALI26308.1 | ALI26338.1 | XA26_24650 | XA26_24950 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.644 |
ALI26308.1 | ALI27235.1 | XA26_24650 | XA26_34080 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.580 |
ALI26308.1 | ALI28006.1 | XA26_24650 | XA26_42010 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.736 |
ALI26338.1 | ALI24981.1 | XA26_24950 | XA26_11280 | Hypothetical protein. | Pyridoxine 5'-phosphate oxidase. | 0.593 |
ALI26338.1 | ALI26308.1 | XA26_24950 | XA26_24650 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.644 |
ALI26338.1 | ALI26339.1 | XA26_24950 | XA26_24960 | Hypothetical protein. | Hypothetical protein. | 0.788 |
ALI26338.1 | ALI27235.1 | XA26_24950 | XA26_34080 | Hypothetical protein. | Hypothetical protein. | 0.530 |
ALI26338.1 | ALI28006.1 | XA26_24950 | XA26_42010 | Hypothetical protein. | Hypothetical protein. | 0.529 |
ALI26338.1 | ALI28978.1 | XA26_24950 | XA26_51840 | Hypothetical protein. | Hypothetical protein. | 0.719 |
ALI26338.1 | dxr | XA26_24950 | XA26_24980 | Hypothetical protein. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.536 |
ALI26338.1 | ispG | XA26_24950 | XA26_25000 | Hypothetical protein. | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.516 |
ALI26338.1 | mmpA | XA26_24950 | XA26_24990 | Hypothetical protein. | Membrane-associated zinc metalloprotease. | 0.536 |
ALI26338.1 | sigI | XA26_24950 | XA26_24970 | Hypothetical protein. | RNA polymerase sigma-70 factor. | 0.536 |
ALI26339.1 | ALI26338.1 | XA26_24960 | XA26_24950 | Hypothetical protein. | Hypothetical protein. | 0.788 |
ALI26339.1 | dxr | XA26_24960 | XA26_24980 | Hypothetical protein. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.547 |
ALI26339.1 | ispG | XA26_24960 | XA26_25000 | Hypothetical protein. | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.552 |
ALI26339.1 | mmpA | XA26_24960 | XA26_24990 | Hypothetical protein. | Membrane-associated zinc metalloprotease. | 0.547 |
ALI26339.1 | sigI | XA26_24960 | XA26_24970 | Hypothetical protein. | RNA polymerase sigma-70 factor. | 0.586 |
ALI27235.1 | ALI26308.1 | XA26_34080 | XA26_24650 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.580 |
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